FSharpBio


FastA

Namespace: FSharpBio.IO

Nested types and modules

TypeDescription
FastaItem<'a>

Fasta item contains header and sequence

Functions and values

Function or valueDescription
createFastaItem header sequence
Signature: header:string -> sequence:'?8640 -> FastaItem<'?8640>
Type parameters: '?8640

Creates FastaItem with header and sequence.

fromFile converter filePath
Signature: converter:(char -> '?8643) -> filePath:string -> seq<FastaItem<seq<'?8643>>>
Type parameters: '?8643

Reads FastaItem from file.

fromFileWithOptional converter filePath
Signature: converter:(char -> Option<'a>) -> filePath:string -> seq<FastaItem<seq<'a>>>
Type parameters: 'a

Reads FastaItem from file allowing for parse to optional pattern.

write toString filePath data
Signature: toString:('T -> char) -> filePath:string -> data:seq<FastaItem<seq<'T>>> -> unit
Type parameters: 'T

Writes FastaItem to file.

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