FSharpBio


AgilentRaw

Namespace: FSharpBio.IO

Nested types and modules

TypeDescription
AgilentControlType
AgilentControlTypeConverter
AgilentDataRaw

Record type representing microarray Agilent raw data item

AgilentRawDescription
GalProbeDescription
ProbeMapping

Record type representing microarray probe mapping

Functions and values

Function or valueDescription
createGalProbeDescription (...)
Signature: block:int -> row:int -> column:int -> id:string -> genename:string -> identscore:'?8670 -> GalProbeDescription
Type parameters: '?8670
galProbeDescriptiontoMapping input
Signature: input:seq<GalProbeDescription> -> Map<string,string>
probeMappingReader (...)
Signature: separator:char -> hasHeader:bool -> path:string -> Map<string,string>

Reads probe mapping. Map: probe name -> gene name

readAgilentDataRaw path
Signature: path:string -> seq<AgilentDataRaw>

Reads agilent raw data from file

readGalProbeDescription (...)
Signature: separator:char -> hasHeader:bool -> path:string -> GalProbeDescription list
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