BioSequences
Namespace: FSharpBio
Nested types and modules
| Module | Description |
| OptionConverter |
Functions and values
| Function or value | Description |
isEqual a b
Signature: a:seq<'?8486> -> b:seq<'?8486> -> bool
Type parameters: '?8486 |
Compares the elemens of two biosequence |
ofAminoAcidString s
Signature: s:string -> seq<AminoAcid>
|
Generates amino acid sequence of one-letter-code raw string |
ofAminoAcidStringWithOptionConverter (...)
Signature: converter:AminoAcidOptionConverter -> s:string -> seq<AminoAcid>
|
Generates amino acid sequence of one-letter-code string using given OptionConverter |
ofNucleotideString s
Signature: s:string -> seq<Nucleotide>
|
Generates nucleotide sequence of one-letter-code raw string |
ofNucleotideStringWithOptionConverter (...)
Signature: converter:NucleotideOptionConverter -> s:string -> seq<Nucleotide>
|
Generates nucleotide sequence of one-letter-code string using given OptionConverter |
toFormula bs
Signature: bs:seq<'?8488> -> Map<Element,float>
Type parameters: '?8488 |
Returns formula |
transcribeCodeingStrand nucs
Signature: nucs:seq<Nucleotide> -> seq<Nucleotide>
|
Transcribe a given DNA coding strand (5'-----3') |
transcribeTemplateStrand nucs
Signature: nucs:seq<Nucleotide> -> seq<Nucleotide>
|
Transcribe a given DNA template strand (3'-----5') |
translate nucleotideOffset rnaSeq
Signature: nucleotideOffset:int -> rnaSeq:seq<Nucleotide> -> seq<AminoAcid>
|
translates nucleotide sequence to aminoacid sequence |
